Teachings

I am an advocate for free knowledge availability. I believe that the availability of knowledge is a fundamental right and that it should be accessible to everyone. Therefore, all my teaching material is CC BY-NC-SA licensed unless otherwise stated. Feel free to share, remix, and adapt the content as long as you give appropriate credit and distribute your contributions under the same license.

Teaching courses

 
 
 

Dimensionality Reduction in Neuroscience

Course held in: 2024 | latest update: October 27, 2024 at 10:38 AM

This intensive 1.5-day course provides a comprehensive introduction to applying machine learning techniques for dimensionality reduction in neuroscience. Par...

 

Assessing Animal Behavior

Course held in: 2024, 2023 | latest update: July 03, 2025 at 10:10 PM

A short introduction into cutting-edge methods for assessing animal behavior in a multi-modal and high-throughput fashion and deciphering animal behavior and...

 

Bioimage Analysis with Napari

Course held in: 2024, 2023 | latest update: July 04, 2025 at 09:09 AM

In this course, we will learn how to use the free open-source software (FOSS) Napari for bioimage analysis. Napari is a fast, interactive, multi-dimensional ...

 

Python: Neuro-Practical

Course held in: 2021, 2020, 2019 | latest update: October 10, 2022 at 11:17 PM

The course is a collection of short tutorials tailored to practical Data Science problems in Neuroscience. The aim of these short tutorials is to demonstrate...

 

Python: Basics for Data Scientists

Course held in: 2023, 2022, 2021, 2020, 2019 | latest update: August 02, 2023 at 07:48 PM

Introductory course into the Python programming language. The course is condensed to the minimum requirements for the use of Python in numerical data analysi...

 

Fiji Short Course

Course held in: 2021, 2020

A short introductory course on using Fiji for Ca2+ images.

 
 

Past courses before 2019

Course held in: 2012-2016 | latest update: July 14, 2021 at 06:10 PM

A summary of courses and lectures I was involved in during my studies and Ph. D. and before 2019.

General teaching materials

Here is some supporting teaching material covering LaTeX and Markdown guides, Python cheat sheets, and more.

 
 
 
 
 

Markdown Guide

latest update: April 14, 2024 at 01:24 PM

Markdown guide with a broad overview of Markdown syntax and ready to use examples for direct application in your Markdown documents and Jupyter notebooks.