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Articles about computational science and data science, neuroscience, and open source solutions. Personal stories are filed under Weekend Stories. Browse all topics here. All posts are CC BY-NC-SA licensed unless otherwise stated. Feel free to share, remix, and adapt the content as long as you give appropriate credit and distribute your contributions under the same license.

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DEVONthink and privacy

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One thing I really love about DEVONthink, is its high security and privacy measures regarding the synchronization of my notes across different devices. No other app that I have so far used offered such high standards.

Bio-image registration with Python

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Which method works best for which registration problem? In this tutorial we compare different methods for the registration of bio-images using Python.

Using VS Code as LaTeX editor

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It doesn’t take much to convert Visual Studio Code into a powerful LaTeX editor. Here are the necessary steps that enable full LaTeX support.

Moving a Mastodon account to another server

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I recently moved my Mastodon account to a new server, including all my followers. I was surprised, how easy and seamless it worked. Here is a how-to, summarizing the migration steps.

Some useful Mastodon links

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This is a curated list of useful Mastodon links.    

I’m on Mastodon

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Mastodon is not just a Twitter alternative. It’s a free and open-source social media platform of its own kind. Here is my story how I got there.

Embedding flickr photos on your Jekyll website

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Easily integrate entire flickr photosets on your Jekyll website via a ruby plugin.

How to run PyTorch on the M1 Mac GPU

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As for TensorFlow, it takes only a few steps to enable a Mac with M1 chip (Apple silicon) for machine learning tasks in Python with PyTorch.

How to run TensorFlow on the M1 Mac GPU

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In just a few steps you can enable a Mac with M1 chip (Apple silicon) for machine learning tasks in Python with TensorFlow.

Is there a difference between miniconda and miniforge?

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Simply said: not really. Miniconda is the company driven minimal conda installer, while miniforge is its community driven variant. In the end, you’ll get the same minimal conda installation on your machine – with a minor difference.

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